BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A09SP1|AL426777
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1779 1704 0.0
>3x_Contig1779
Length = 24855
Score = 1704 bits (859), Expect = 0.0
Identities = 874/877 (99%), Gaps = 2/877 (0%)
Strand = Plus / Plus
Query: 1 cccactggtctgaagttaccactgcttgcacaaacctttcaaatacatccaaattccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23881 cccactggtctgaagttaccactgcttgcacaaacctttcaaatacatccaaattccttc 23940
Query: 61 taccattgaacgttacaatcctgtcggtatccaaagtccacgtcagatcataacccgcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23941 taccattgaacgttacaatcctgtcggtatccaaagtccacgtcagatcataacccgcgt 24000
Query: 121 tggtaattgtatcaagtaaacgatcaatccagcctctagggtcttccagacgcgtcacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24001 tggtaattgtatcaagtaaacgatcaatccagcctctagggtcttccagacgcgtcacat 24060
Query: 181 ttagttcggatctcaatggtttgataatttctaccgctggaaatccgtccaagcgtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24061 ttagttcggatctcaatggtttgataatttctaccgctggaaatccgtccaagcgtttac 24120
Query: 241 atagcatgttaccaaataattcacaatcaacctcaaagaaggcaaaattaatacctgatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24121 atagcatgttaccaaataattcacaatcaacctcaaagaaggcaaaattaatacctgatg 24180
Query: 301 ttaaggcaggatcaacaatatcaacttccgacaaaacggagctttcactcaactgttcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24181 ttaaggcaggatcaacaatatcaacttccgacaaaacggagctttcactcaactgttcga 24240
Query: 361 acaccggctttagtttcttacaatgtgagcaccaattggtataatatttaaccactgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24241 acaccggctttagtttcttacaatgtgagcaccaattggtataatatttaaccactgtgt 24300
Query: 421 acgtagggttggtagcattgaaattgttgacaactccataaaactggtctaacgacgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24301 acgtagggttggtagcattgaaattgttgacaactccataaaactggtctaacgacgtca 24360
Query: 481 cggattcaactattgcgagggcaacggttgcaatcagagatagacataagaggatcttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24361 cggattcaactattgcgagggcaacggttgcaatcagagatagacataagaggatcttca 24420
Query: 541 tacttgagttttagaagaattccatatggtttggttgtatctagtagggaattcgaacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24421 tacttgagttttagaagaattccatatggtttggttgtatctagtagggaattcgaacca 24480
Query: 601 tcatctaagaagccctttatttgattgaaccacttcttcaaatcaaggtattttatttaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24481 tcatctaagaagccctttatttgattgaaccacttcttcaaatcaaggtattttatttaa 24540
Query: 661 tcttttttttttttatggaagttgtatttctaagcacgagttaattagaaagtgtgaatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24541 tcttttttttttttatggaagttgtatttctaagcacgagttaattagaaagtgtgaatg 24600
Query: 721 ggtatatgtttatatacttagattctcttatccaaaatagttctggcacaaaacatgtag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24601 ggtatatgtttatatacttagattctcttatccaaaatagttctggcacaaaacatgtag 24660
Query: 781 tatgttgaacgtgagatacacatgagcaatgcacaagtgaaagatgtg-aamactatttt 839
|||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||
Sbjct: 24661 tatgttgaacgtgagatacacatgagcaatgcacaagtgaaagatgtgaaacacta-ttt 24719
Query: 840 attaagatgcagagtcatgtctagaaatcgtatataa 876
|||||||||||||||||||||||||||||||||||||
Sbjct: 24720 attaagatgcagagtcatgtctagaaatcgtatataa 24756
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,753
Number of Sequences: 1807
Number of extensions: 12753
Number of successful extensions: 105
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)